The detailed information of tRNA gene sequence


Sequence ID>WENV170720062
Genome IDLSQX01139261
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 152
End posion on genome 225
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caatgattga
tRNA gene sequence 
GGCGGCATAGCCAAGCGGGAAGGCAGAGGACTGCAAATCCTTCATCCTCGGTTCAAATCC
GAGTGCCGCCTCCA
Downstream region at tRNA end position 
attgtttgaa
Secondary structure (Cloverleaf model)
>WENV170720062	Cys	GCA
                   a      TCCA attgtttgaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A G C C     A
        G A        A      | | | | |     A
      C     A C C G       C T C G G     C
      G       | | |                 T T
      G     A G G C
        G A        A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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