The detailed information of tRNA gene sequence


Sequence ID>WENV170720065
Genome IDLSQX01139362
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1044
End posion on genome 1118
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
caccattatg
tRNA gene sequence 
GTGGGAATAGCTCAGCTGGTTAGAGCGTCGGATTGTGGTTCCGAAGGCCGCGGGTTCGAA
TCCCGTTTTCCACCCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170720065	His	GTG
                   g      CCnn nnnnnnnnnn
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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