The detailed information of tRNA gene sequence


Sequence ID>WENV170720096
Genome IDLSQX01140896
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1225
End posion on genome 1301
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaaatattt
tRNA gene sequence 
CGGGACGTGGCGAAGTTTGGTATCGCGCCTGCTTTGGGAGCAGGATGCCGCTGGTTCAAA
TCCAGTCGTCCCGACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170720096	Pro	TGG
                   t      ACCA nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     A
    T       A G C G       G C T G G     C
    T       | | | |                 T T
    G       T C G C
      G T A        G     ATGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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