The detailed information of tRNA gene sequence


Sequence ID>WENV170720135
Genome IDLSQX01142177
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3141
End posion on genome 3227
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
taattatatt
tRNA gene sequence 
GCCCAGATGGTGGAATTGGTAGACACGCCAGGTTGAGGGCCTGGTGGCCGTTTTTGGCTG
TGCAAGTTCGAGTCTTGTTCTGGGCACtg
Downstream region at tRNA end position 
cgggttctta
Secondary structure (Cloverleaf model)
>WENV170720135	Leu	GAG
                   t      ACtg cgggttctta
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T T C     A
      T A A        G      + | | | |     G
    T       G G T G       G C A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCCGTTTTTGGCTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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