The detailed information of tRNA gene sequence


Sequence ID>WENV170720175
Genome IDLSQX01144026
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 180
End posion on genome 94
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agcagtcttc
tRNA gene sequence 
GCGGCCATGGCGGAACTGGTAGACGCGCCAGTTTCAGGAGCTGGTAGCCTTAAAGCTGTG
TGAGTTCAAGTCTCACTGGCCGCACCA
Downstream region at tRNA end position 
tgggggcata
Secondary structure (Cloverleaf model)
>WENV170720175	Leu	CAG
                   c      ACCA tgggggcata
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     C A C T C     A
      C A A        G      | | | | |     A
    T       G G C G       G T G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGCCTTAAAGCTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    T + G
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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