The detailed information of tRNA gene sequence


Sequence ID>WENV170720226
Genome IDLSQX01145279
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1312
End posion on genome 1237
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cattttttag
tRNA gene sequence 
GGGCCCGTAGTCTAGCCTGGAATATGACGTGGGACTTCGGATCCCAAGGTCGGGGGTTCA
AATCCCCCCGGGTCCGtta
Downstream region at tRNA end position 
tcgttatgaa
Secondary structure (Cloverleaf model)
>WENV170720226	Arg	TCG
                   g      Gtta tcgttatgaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       G G G G G     C
  G           | | |                 T T
  G         T G A C
    A A T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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