The detailed information of tRNA gene sequence


Sequence ID>WENV170720247
Genome IDLSQX01145924
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5238
End posion on genome 5151
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcgagcatt
tRNA gene sequence 
GGAGGATTGGCCGAGTGGCTTAAGGCACCGTCTTGGAAAGGCGGCGAAGTGCAAGCTTCC
GTGAGTTCGAATCTCATGTCCTCCGCCA
Downstream region at tRNA end position 
tattcaatta
Secondary structure (Cloverleaf model)
>WENV170720247	Ser	GGA
                   t      GCCA tattcaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T + G          T A
                    T     T A C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGAAGTGCAAGCTTCC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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