The detailed information of tRNA gene sequence


Sequence ID>WENV170720327
Genome IDLSQX01149077
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 127
End posion on genome 51
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccaattatat
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGCCAGGGGTTCGAA
TCCCTTCAGGCGCGCCA
Downstream region at tRNA end position 
ttggctttat
Secondary structure (Cloverleaf model)
>WENV170720327	Arg	TCT
                   t      GCCA ttggctttat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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