The detailed information of tRNA gene sequence


Sequence ID>WENV170720373
Genome IDLSQX01150974
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 339
End posion on genome 252
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attatataaa
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTTTCTCCGCCT
Downstream region at tRNA end position 
ctttctgaaa
Secondary structure (Cloverleaf model)
>WENV170720373	Ser	TGA
                   a      GCCT ctttctgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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