The detailed information of tRNA gene sequence


Sequence ID>WENV170720399
Genome IDLSQX01151826
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1961
End posion on genome 1886
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gacccctgtg
tRNA gene sequence 
GCCGGGGTAGGGTAGAGGTCCATCCTGTGGCCCTGTGGAGGCTACGACCCGAGTTCGATT
CTCGGTCCCGGCCCTA
Downstream region at tRNA end position 
atcattttct
Secondary structure (Cloverleaf model)
>WENV170720399	His	GTG
                   g      CCTA atcattttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G G C T C     A
      A G A        A      | | | | |     G
    G       T G G G       C C G A G     C
    G         | | +                 T T
    T       T C C T
      C C A        G     CGAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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