The detailed information of tRNA gene sequence


Sequence ID>WENV170720466
Genome IDLSQX01153731
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 43729
End posion on genome 43638
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgacgacagt
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTATAAGAGGTACCCCTGCTAAGGGTATAGGCCGTTTACGCG
GTGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tgatttgaac
Secondary structure (Cloverleaf model)
>WENV170720466	Ser	GCT
                   t      GCCA tgatttgaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     A
  G         A C T C       G A G G G     C
  C           | | |                 T T
  T         A G A G
    A T A          G     TAGGCCGTTTACGCGGTGC
                    T - A
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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