The detailed information of tRNA gene sequence


Sequence ID>WENV170720467
Genome IDLSQX01153859
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17298
End posion on genome 17385
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgttgtcc
tRNA gene sequence 
GGAGAGCTGTCCGAGTGGTCTATGGTGACTGACTTGAAATCAGTTGGGTGTCACAGCCCC
AGGGGTTCGAATCCTCTGCTCTCCGCCA
Downstream region at tRNA end position 
ggctttattc
Secondary structure (Cloverleaf model)
>WENV170720467	Ser	TGA
                   c      GCCA ggctttattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C T       A G G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGGGTGTCACAGCCCC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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