The detailed information of tRNA gene sequence


Sequence ID>WENV170720507
Genome IDLSQX01155982
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 22469
End posion on genome 22545
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaaaatagtt
tRNA gene sequence 
CGGGGTGTGGCGCAGTTGGCTAGCGTACTTGCATGGGGTGCAAGGGGTCGGAAGTTCGAG
TCTTCTCACCCCGACGA
Downstream region at tRNA end position 
aataaagagg
Secondary structure (Cloverleaf model)
>WENV170720507	Pro	GGG
                   t      ACGA aataaagagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T T C     A
      T G A        G      + | | | |     G
    T       C G C G       G G A A G     C
    G       | | | +                 T T
    G       G C G T
      C T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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