The detailed information of tRNA gene sequence


Sequence ID>WENV170720557
Genome IDLSQX01157516
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 347
End posion on genome 271
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcaggaccat
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCGTCGTTCGGGACGACGAGGTCGCAGGTTCAAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
gcaagaagcc
Secondary structure (Cloverleaf model)
>WENV170720557	Pro	CGG
                   t      ACCA gcaagaagcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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