The detailed information of tRNA gene sequence


Sequence ID>WENV170720563
Genome IDLSQX01157667
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2973
End posion on genome 2888
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccacaacac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTTAAGGTGCACGCCTGGAACGCGTGTGTACGCAAGTACCGT
GAGTTCGAATCTCACCTTCTCCGCCA
Downstream region at tRNA end position 
tcataaaaaa
Secondary structure (Cloverleaf model)
>WENV170720563	Ser	GGA
                   c      GCCA tcataaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G A G     C
    G         | | |                 T T
    T       A G G T
      T T A        G     TGTACGCAAGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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