The detailed information of tRNA gene sequence


Sequence ID>WENV170720635
Genome IDLSQX01160231
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3805
End posion on genome 3882
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctctaattca
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTTAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGA
ATCCGTCATCGCCCACCG
Downstream region at tRNA end position 
ggccgcttct
Secondary structure (Cloverleaf model)
>WENV170720635	Val	TAC
                   a      ACCG ggccgcttct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C T G C C     A
    T C G A        A      | + | | |     G
  G         C T C G       G G C G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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