The detailed information of tRNA gene sequence


Sequence ID>PHG0100200
Genome IDAY078382
Search identical group
Phylum/ClassPodoviridae
SpeciesPseudomonas virus PaP3 (AY078382)
Start position on genome 1708
End posion on genome 1783
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagccattat
tRNA gene sequence 
GGCCCATTAACTTAGCGGTTAGAGTGCTCCCCTGTCTAGGGAGAAGCCGTCGGTTCGAAT
CCGACATGGGTCGCCA
Downstream region at tRNA end position 
acaaaggtcg
Secondary structure (Cloverleaf model)
>PHG0100200	Asp	GTC
                   t      GCCA acaaaggtcg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     C A G C C     A
      C G A        A      | | | | |     G
    G       T T C A       G T C G G     C
    G       + | | |                 T T
    T       G A G T
      T A          G     AAGCC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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