The detailed information of tRNA gene sequence


Sequence ID>WENV170720683
Genome IDLSQX01162421
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3093
End posion on genome 3169
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacgtatat
tRNA gene sequence 
CGCGGGGTGGAGCAGCTAGGTGGCTCGTCGGGCTCATAACCCGGAGGTCGCAAGTTCGAT
TCCTGCCCCCGCTACAA
Downstream region at tRNA end position 
agctaaattt
Secondary structure (Cloverleaf model)
>WENV170720683	Met	CAT
                   t      ACAA agctaaattt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C G T C C     A
      C G A        G      | | |   |     G
    T       C G A G       G C A A G     C
    A       | | | |                 T T
    G       G C T C
      G T G        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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