The detailed information of tRNA gene sequence


Sequence ID>WENV170720684
Genome IDLSQX01162450
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 29432
End posion on genome 29506
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGAGGTAGCTCGTTGGGCTCATAACCCAAAGGCCGTAGGTTCGAATC
CTGCCCCCGCTACTA
Downstream region at tRNA end position 
aaagagcctg
Secondary structure (Cloverleaf model)
>WENV170720684	Met	CAT
                   t      ACTA aaagagcctg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
        G A        G      | + | | |     G
      A     C G A G       G T A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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