The detailed information of tRNA gene sequence


Sequence ID>WENV170720761
Genome IDLSQX01165582
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 73
End posion on genome 146
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaatattgc
tRNA gene sequence 
GGCGACATAGCCAAGAGGCAAGGCAGAGGACTGCAAATCCTTTATCCCCGGTTCAAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
aaacctcagc
Secondary structure (Cloverleaf model)
>WENV170720761	Cys	GCA
                   c      TCCA aaacctcagc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      A     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        C A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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