The detailed information of tRNA gene sequence


Sequence ID>WENV170720780
Genome IDLSQX01166068
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5612
End posion on genome 5688
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatttatggt
tRNA gene sequence 
GGGGTCGTAGCTCAGTCGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttttaatagg
Secondary structure (Cloverleaf model)
>WENV170720780	Asp	GTC
                   t      GCCA ttttaatagg
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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