The detailed information of tRNA gene sequence


Sequence ID>WENV170720794
Genome IDLSQX01166830
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1197
End posion on genome 1270
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caatagttac
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTAGAGCATCTGACTCTTAATCAGAGGGTCGCAGGTTCGAGA
CCTGCACGGCCTACtg
Downstream region at tRNA end position 
tatagtatgc
Secondary structure (Cloverleaf model)
>WENV170720794	Lys	CTT
                   c      ACtg tatagtatgc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          A G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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