The detailed information of tRNA gene sequence


Sequence ID>WENV170720801
Genome IDLSQX01167019
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3364
End posion on genome 3293
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gatatttccc
tRNA gene sequence 
GGGCTCGTATATCAGGGGTAGATAGCTACGTTCGCAACGTAGATGCCGCGGGTTCAAATC
CCGCCGGGTCCAttc
Downstream region at tRNA end position 
gttttttgct
Secondary structure (Cloverleaf model)
>WENV170720801	Ala	CGC
                   c      Attc gttttttgct
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A T       G C G G G     C
      G     | | | |                 T T
      G     G A T A
        T A        G     ATGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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