The detailed information of tRNA gene sequence


Sequence ID>WENV170720838
Genome IDLSQX01168659
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 619
End posion on genome 546
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgtttcagac
tRNA gene sequence 
GGGCCTGTAGCTCAGTCGGTTAGAGCACTTCTCTGATAAGGAAGGGGTCATTAGTTCAAC
TCTAATCAGGCCCAgct
Downstream region at tRNA end position 
cgacgggcgc
Secondary structure (Cloverleaf model)
>WENV170720838	Ile	GAT
                   c      Agct cgacgggcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     T A A T C     A
      T G A        A      | | | | |     A
    C       C T C G       A T T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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