The detailed information of tRNA gene sequence


Sequence ID>WENV170720847
Genome IDLSQX01168800
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 58012
End posion on genome 58098
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cttaatccat
tRNA gene sequence 
GCGGAAGTGGCGGAATTGGCAGACGCGCTAGCTTCAGGTGCTAGTGATCGCAAGATCGTG
CAGGTTCAAGTCCTGTTTTCCGCACCA
Downstream region at tRNA end position 
tctaaaaggt
Secondary structure (Cloverleaf model)
>WENV170720847	Leu	CAG
                   t      ACCA tctaaaaggt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGATCGCAAGATCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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