The detailed information of tRNA gene sequence


Sequence ID>WENV170720861
Genome IDLSQX01169270
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 355
End posion on genome 268
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atagaagcga
tRNA gene sequence 
GCCGGGATAGTCTAGTCCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCTGGCACCTC
GGGAGTTCAAATCTCCCTCCCGGCGCTA
Downstream region at tRNA end position 
catcttctat
Secondary structure (Cloverleaf model)
>WENV170720861	Ser	TGA
                   a      GCTA catcttctat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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