The detailed information of tRNA gene sequence


Sequence ID>WENV170720910
Genome IDLSQX01171035
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1413
End posion on genome 1489
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgcgccgg
tRNA gene sequence 
GGCTGGGTAGCTCAGATGGTTAGAGCGGTGGATTCATAACCCACAGGTCGGCGGTTCGAT
CCCGCCCCCAGCCACCA
Downstream region at tRNA end position 
ccctttattg
Secondary structure (Cloverleaf model)
>WENV170720910	Met	CAT
                   g      ACCA ccctttattg
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          C T
                    T     C C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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