The detailed information of tRNA gene sequence


Sequence ID>WENV170720916
Genome IDLSQX01171324
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11305
End posion on genome 11232
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acttttgtct
tRNA gene sequence 
GCTGATATAGTGTAGTGGCCAATCATGCCGGCCTCTCACGCCGGCGACTGGGGTTCGAAT
CCCCATATCAGCACtg
Downstream region at tRNA end position 
tttatttaaa
Secondary structure (Cloverleaf model)
>WENV170720916	Glu	CTC
                   t      ACtg tttatttaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     A C C C C     A
      T G A        A      | | | | |     G
    G       T G T G       T G G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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