The detailed information of tRNA gene sequence


Sequence ID>WENV170720936
Genome IDLSQX01171995
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 443
End posion on genome 519
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggatgacaac
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGATAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttcattcgg
Secondary structure (Cloverleaf model)
>WENV170720936	Trp	CCA
                   c      GCCA cttcattcgg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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