The detailed information of tRNA gene sequence


Sequence ID>WENV170720937
Genome IDLSQX01172015
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4936
End posion on genome 5020
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aactatatat
tRNA gene sequence 
GGAGGGATACCCAAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCACTGACTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
gaacccgcag
Secondary structure (Cloverleaf model)
>WENV170720937	Tyr	GTA
                   t      ACCA gaacccgcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCACTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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