The detailed information of tRNA gene sequence


Sequence ID>WENV170720939
Genome IDLSQX01172236
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 85087
End posion on genome 85011
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acccgtcatg
tRNA gene sequence 
GCCGGGTTGGGGTAGCTTGGTTATCCTGAGGGACTGTGGATCCCTCGACTCGGGTTCAAA
TCTCGGACCCGGCCCCT
Downstream region at tRNA end position 
tacttctgtc
Secondary structure (Cloverleaf model)
>WENV170720939	His	GTG
                   g      CCCT tacttctgtc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G G C T C     A
    T C G A        G      + | | + |     A
  T         T G G G       T C G G G     C
  G           | | +                 T T
  G         T C C T
    T T A          G     CGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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