The detailed information of tRNA gene sequence


Sequence ID>WENV170720975
Genome IDLSQX01173651
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17369
End posion on genome 17454
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccacgctcat
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTGCGAAAGTACCGT
GGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
gaaacccgag
Secondary structure (Cloverleaf model)
>WENV170720975	Ser	TGA
                   t      GCCA gaaacccgag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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