The detailed information of tRNA gene sequence


Sequence ID>WENV170720976
Genome IDLSQX01173651
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17477
End posion on genome 17569
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgccttgaaa
tRNA gene sequence 
GGAGAGATGACCGAGTAGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTTATACT
CCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatagaaaaa
Secondary structure (Cloverleaf model)
>WENV170720976	Ser	GCT
                   a      GCCA tatagaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G         + | | |                 T T
  C         T G G T
    C G A          G     TGTGGGGGTTATACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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