The detailed information of tRNA gene sequence


Sequence ID>WENV170720984
Genome IDLSQX01174082
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1513
End posion on genome 1598
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcgttttcc
tRNA gene sequence 
GGAGGGCTGTCCGAGTGGTCTATGGTGGCTGACTTGAAATCAGCTGGGCGAAAGCCCCGG
GGGTTCGAATCCCTCGCCCTCCGCCA
Downstream region at tRNA end position 
tcttttcaca
Secondary structure (Cloverleaf model)
>WENV170720984	Ser	TGA
                   c      GCCA tcttttcaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGGGCGAAAGCCCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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