The detailed information of tRNA gene sequence


Sequence ID>WENV170720998
Genome IDLSQX01174898
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 92
End posion on genome 165
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caggtgagcc
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGTTCAAAT
CCCCCTGAGTCCACtg
Downstream region at tRNA end position 
ggcagggagt
Secondary structure (Cloverleaf model)
>WENV170720998	Ala	TGC
                   c      ACtg ggcagggagt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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