The detailed information of tRNA gene sequence


Sequence ID>WENV170721003
Genome IDLSQX01175153
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 375
End posion on genome 299
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgctacaaat
tRNA gene sequence 
TGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCCTTGGTTCAAA
TCCAAGCCCCGCTACCA
Downstream region at tRNA end position 
acttcaagcc
Secondary structure (Cloverleaf model)
>WENV170721003	Met	CAT
                   t      ACCA acttcaagcc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A A C C     A
      C G A        G      | | | | |     A
    C       C G A G       C T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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