The detailed information of tRNA gene sequence


Sequence ID>WENV170721022
Genome IDLSQX01176108
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6132
End posion on genome 6209
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cccatcgtca
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGTCGGTTCGA
ATCCGACTATCCCGACCA
Downstream region at tRNA end position 
tagaacttaa
Secondary structure (Cloverleaf model)
>WENV170721022	Pro	TGG
                   a      ACCA tagaacttaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     C A G C C     A
    C C G A        A      | | | | |     G
  T         C G C G       G T C G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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