The detailed information of tRNA gene sequence


Sequence ID>WENV170721065
Genome IDLSQX01178064
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11341
End posion on genome 11418
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aattgcgcgt
tRNA gene sequence 
CGGGGCGTAGCGTAGTTTGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttttatttgc
Secondary structure (Cloverleaf model)
>WENV170721065	Pro	TGG
                   t      ACCA ttttatttgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         T G C G       G G A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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