The detailed information of tRNA gene sequence


Sequence ID>WENV170721094
Genome IDLSQX01179003
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1265
End posion on genome 1189
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataaaatcct
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAATACATGCCTGTCACGAATGGGGTCGCGAGTTCGAG
TCTCGTCCGGACCGCAA
Downstream region at tRNA end position 
agcccctcca
Secondary structure (Cloverleaf model)
>WENV170721094	Asp	GTC
                   t      GCAA agcccctcca
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G   A
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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