The detailed information of tRNA gene sequence


Sequence ID>WENV170721113
Genome IDLSQX01179493
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7421
End posion on genome 7348
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gtgagagttc
tRNA gene sequence 
GCCTTGGTAGCTCAGTGGATAGAGCACCGCTCTCCTAAAGCGGGTGTCGAAGGTTCGATT
CCTTTCCAGGGCACtg
Downstream region at tRNA end position 
ctgtgtgtat
Secondary structure (Cloverleaf model)
>WENV170721113	Arg	CCT
                   c      ACtg ctgtgtgtat
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     G - C
                     G - C          T T
                    T     T T T C C     A
      T G A        A      + | | | |     G
    G       C T C G       G A A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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