The detailed information of tRNA gene sequence


Sequence ID>WENV170721114
Genome IDLSQX01179508
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12814
End posion on genome 12888
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaggtaattt
tRNA gene sequence 
GGACTCGTGGTCTAGGTGGTTATGACGCCAGCCTTACATGCTGGAGGTCAGGGGTTCGAA
TCCCTTCGGGTCCACtc
Downstream region at tRNA end position 
attttttttc
Secondary structure (Cloverleaf model)
>WENV170721114	Val	TAC
                   t      ACtc attttttttc
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      G G A        G      | + | | |     G
    T       T C T G       A G G G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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