The detailed information of tRNA gene sequence


Sequence ID>WENV170721140
Genome IDLSQX01180847
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1138
End posion on genome 1063
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cagtttattt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGCACGTGGTTTGGGACCATGGGGCCGGGGGTTCAAGT
CCTCTCACCCCGACCA
Downstream region at tRNA end position 
aaaatccttc
Secondary structure (Cloverleaf model)
>WENV170721140	Pro	TGG
                   t      ACCA aaaatccttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | + | |     A
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGCC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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