The detailed information of tRNA gene sequence


Sequence ID>WENV170721145
Genome IDLSQX01181012
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 250
End posion on genome 334
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agttttatac
tRNA gene sequence 
GGAGGGATACCCAAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCACTGACTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
ataaaaaaac
Secondary structure (Cloverleaf model)
>WENV170721145	Tyr	GTA
                   c      ACCA ataaaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCACTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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