The detailed information of tRNA gene sequence


Sequence ID>WENV170721176
Genome IDLSQX01181955
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5927
End posion on genome 6012
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacttgcagt
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTCTGCCCTTGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
cttagatgtt
Secondary structure (Cloverleaf model)
>WENV170721176	Ser	TGA
                   t      GCCA cttagatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTCTGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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