The detailed information of tRNA gene sequence


Sequence ID>WENV170721235
Genome IDLSQX01182909
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 33470
End posion on genome 33543
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tggctacacc
tRNA gene sequence 
GGGCAGGTAGATCAGTTGGAAGATCGCTACCTTGGCATGGTAGAGGCCGGGGGTTCAAAT
CCCCCCCTGTCCACtt
Downstream region at tRNA end position 
tcattctaac
Secondary structure (Cloverleaf model)
>WENV170721235	Ala	GGC
                   c      ACtt tcattctaac
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T A G       G G G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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