The detailed information of tRNA gene sequence


Sequence ID>WENV170721236
Genome IDLSQX01182909
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 58272
End posion on genome 58347
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cggaggtaac
tRNA gene sequence 
GCTCCCGTAGTGTAGTGGCCAATCATGAAGCCCTCTCGAGGCTTCGACTCGGGTTCAAAT
CCCGACGGGAGCACCA
Downstream region at tRNA end position 
ttctccgttt
Secondary structure (Cloverleaf model)
>WENV170721236	Glu	CTC
                   c      ACCA ttctccgttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A G C C C     A
      T G A        A      | | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    A - T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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