The detailed information of tRNA gene sequence


Sequence ID>WENV170721237
Genome IDLSQX01182909
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 56228
End posion on genome 56142
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagccaccag
tRNA gene sequence 
GCCGAGGTGGCCCAGACCGGTAAGGCGCAAGCCTGGAAAGCTTGTGTCCGCAAGGACTCG
TGAGTTCAAATCTCACCCTCGGCGCCA
Downstream region at tRNA end position 
tcctttttac
Secondary structure (Cloverleaf model)
>WENV170721237	Ser	GGA
                   g      GCCA tcctttttac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      A G A        G      | | | | |     A
    C       C C C G       G T G A G     C
    C         | | |                 T T
    G       A G G C
      G T A        G     TGTCCGCAAGGACTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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