The detailed information of tRNA gene sequence


Sequence ID>WENV170721270
Genome IDLSQX01184005
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2721
End posion on genome 2650
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agggtaacag
tRNA gene sequence 
GGGCCGATAGATCAGGGGTAGATCGCTTCCTTGGCATGGAAGAGGCCGCGGGTTCAATTC
CCGCTCGGTCCAtgt
Downstream region at tRNA end position 
ttgctgttct
Secondary structure (Cloverleaf model)
>WENV170721270	Ala	GGC
                   g      Atgt ttgctgttct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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