The detailed information of tRNA gene sequence


Sequence ID>WENV170721301
Genome IDLSQX01185061
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 62815
End posion on genome 62892
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agaagtacaa
tRNA gene sequence 
GGGCCCGTAGCTTAGCCTGGCTGGAGCGCCCGGCTGATAACCGGGAGGCCATGAGTTCAA
ATCTCATCGGGCCCACTA
Downstream region at tRNA end position 
tcaccttctg
Secondary structure (Cloverleaf model)
>WENV170721301	Ile	GAT
                   a      ACTA tcaccttctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C T C     A
    C C G A        A      | | | | |     A
  T         T T C G       A T G A G     C
  G         + | | |                 T T
  G         G A G C
    C T G          G     AGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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