The detailed information of tRNA gene sequence


Sequence ID>WENV170721302
Genome IDLSQX01185061
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 56890
End posion on genome 56802
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccgccataa
tRNA gene sequence 
GCCGAGGTAGCAAAGCCCGGATCACCGCGCCAGCCTTGAGAGCTGGTGTCCGCAAGGACT
CGGGAGTTCGAATCTCCCCCTCGGCGCCT
Downstream region at tRNA end position 
catacttcct
Secondary structure (Cloverleaf model)
>WENV170721302	Ser	TGA
                   a      GCCT catacttcct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C C G A        A      | | | | |     G
  C         A A C G       G G G A G     C
  G             | |                 T T
  G         C C G C
    A T C A        G     TGTCCGCAAGGACTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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